{
  "_id": "6a1fefbfb401979e73441c16",
  "Package": "pactr",
  "Type": "Package",
  "Title": "An Interface to the Pandemic PACT Database",
  "Version": "0.0.0.9000",
  "Authors@R": "person(\"Ernest\", \"Guevarra\", \ncomment = c(ORCID = \"0000-0002-4887-4415\"),\nemail = \"ernest@guevarra.io\", role = c(\"aut\", \"cre\"))",
  "Description": "The Pandemic PACT <https://www.pandemicpact.org/> monitors\nand analyses global funding and research evidence related to\ndiseases with pandemic potential, as well as broader research\npreparedness efforts, and is equipped to pivot in response to\noutbreaks. It collects, curates, codes, and analyses data in\nalignment with WHO priority diseases and other selected\nillnesses, including pandemic influenza, mpox, and plague.\nPandemic PACT aims to guide policy and decision-making for\nresearch funders, policymakers, researchers, multilateral\nagencies. The database is publicly available for download from\nits website and from Figshare. This package interfaces with the\nproject's Figshare repository to provide programmatic access to\nthe database along with other data products provided by the\nproject.",
  "License": "GPL (>= 3)",
  "Remotes": [
    "ropenscilabs/deposits"
  ],
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Language": "en-GB",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "URL": "https://github.com/OxfordIHTM/pactr, https://oxford-ihtm.io/pactr/",
  "BugReports": "https://github.com/OxfordIHTM/pactr/issues",
  "Config/testthat/edition": "3",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev libxml2-dev\nlibssl-dev libnode-dev",
  "Repository": "https://oxfordihtm.r-universe.dev",
  "Date/Publication": "2024-10-31 08:37:37 UTC",
  "RemoteUrl": "https://github.com/OxfordIHTM/pactr",
  "RemoteRef": "HEAD",
  "RemoteSha": "949c74d8a8394082f92dc84053ab1460415a5289",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-03 09:07:41 UTC",
    "User": "root"
  },
  "Author": "Ernest Guevarra [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-4887-4415>)",
  "Maintainer": "Ernest Guevarra <ernest@guevarra.io>",
  "MD5sum": "4b2ea0182fd27cf80f9b6a3f8b17adcc",
  "_user": "oxfordihtm",
  "_type": "src",
  "_file": "pactr_0.0.0.9000.tar.gz",
  "_fileid": "38eb0a8fd28977d0267b9edded21e98c57fabb08c66b7d7d9259462d862fd2a5",
  "_filesize": 1176905,
  "_sha256": "38eb0a8fd28977d0267b9edded21e98c57fabb08c66b7d7d9259462d862fd2a5",
  "_created": "2026-06-03T09:07:41.000Z",
  "_published": "2026-06-03T09:11:27.652Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79259670564,
      "time": 163,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "7380345984"
    },
    {
      "job": 79259670547,
      "time": 170,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7380346901"
    },
    {
      "job": 79259670507,
      "time": 123,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "ERROR",
      "artifact": "7380339240"
    },
    {
      "job": 79259670530,
      "time": 123,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7380339396"
    },
    {
      "job": 79259033195,
      "time": 218,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7380286606"
    },
    {
      "job": 79259670536,
      "time": 127,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7380332668"
    },
    {
      "job": 79259670588,
      "time": 138,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "7380336641"
    },
    {
      "job": 79259670518,
      "time": 111,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "ERROR",
      "artifact": "7380327344"
    },
    {
      "job": 79259670605,
      "time": 117,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7380329342"
    }
  ],
  "_buildurl": "https://github.com/r-universe/oxfordihtm/actions/runs/26874760967",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/OxfordIHTM/pactr",
  "_commit": {
    "id": "949c74d8a8394082f92dc84053ab1460415a5289",
    "author": "Ernest Guevarra <5742010+ernestguevarra@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #186 from OxfordIHTM/dev\n\nshift to sandstone - primary pkgdown template; fix #185",
    "time": 1730363857
  },
  "_maintainer": {
    "name": "Ernest Guevarra",
    "email": "ernest@guevarra.io",
    "login": "ernestguevarra",
    "mastodon": "@ernestguevarra@mastodon.social",
    "bluesky": "@ernest.guevarra.io",
    "linkedin": "in/ernestguevarra",
    "orcid": "0000-0002-4887-4415",
    "description": "Public Health Specialist, Spatial Epidemiologist, R Developer\n",
    "uuid": 5742010
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.2.0",
      "role": "Depends"
    },
    {
      "package": "countrycode",
      "role": "Imports"
    },
    {
      "package": "deposits",
      "version": ">= 0.2.1.60",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "openxlsx2",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "withr",
      "role": "Imports"
    },
    {
      "package": "DiagrammeR",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "spelling",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "webshot",
      "role": "Suggests"
    }
  ],
  "_owner": "oxfordihtm",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "ernestguevarra",
      "count": 166,
      "uuid": 5742010
    }
  ],
  "_userbio": {
    "uuid": 35218318,
    "type": "organization",
    "name": "Oxford iHealth"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/pactr"
  },
  "_devurl": "https://github.com/oxfordihtm/pactr",
  "_pkgdown": "https://oxford-ihtm.io/pactr/",
  "_searchresults": 13,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/pactr.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "pact_cite",
    "pact_client_set",
    "pact_download_figshare",
    "pact_download_figshare_private",
    "pact_download_website",
    "pact_get_filename",
    "pact_get_group_id",
    "pact_list",
    "pact_list_data",
    "pact_list_download",
    "pact_process_figshare",
    "pact_process_figshare_category",
    "pact_process_figshare_category_funder",
    "pact_process_figshare_category_pathogen",
    "pact_process_website",
    "pact_read_figshare",
    "pact_read_figshare_dictionary",
    "pact_read_figshare_download",
    "pact_read_website",
    "pact_table_category",
    "pact_table_disease",
    "pact_table_location_funder",
    "pact_table_location_institution",
    "pact_table_location_research",
    "pact_table_topic_group"
  ],
  "_datasets": [
    {
      "name": "pact_mpox_priority",
      "title": "Pandemic PACT Mpox Priorities",
      "object": "pact_mpox_priority",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "mpox_priority_code",
        "mpox_priority",
        "mpox_subpriority_code",
        "mpox_subpriority"
      ],
      "rows": 23,
      "table": true,
      "tojson": true
    },
    {
      "name": "pact_research_category",
      "title": "Pandemic PACT Research Categories",
      "object": "pact_research_category",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "research_category_code",
        "research_category",
        "research_subcategory_code",
        "research_subcategory"
      ],
      "rows": 70,
      "table": true,
      "tojson": true
    },
    {
      "name": "who_country_info",
      "title": "World Health Organization (WHO) Country Information",
      "object": "who_country_info",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "country_iso3c",
        "who_short_name",
        "formal_name",
        "who_region",
        "un_region"
      ],
      "rows": 194,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "pact_cite",
      "title": "Cite an output/asset available from the Pandemic PACT Figshare repository",
      "topics": [
        "pact_cite"
      ]
    },
    {
      "page": "pact_client",
      "title": "Initiate a new Pandemic PACT Figshare client session",
      "topics": [
        "pact_client_set"
      ]
    },
    {
      "page": "pact_download",
      "title": "Download outputs/assets from Pandemic PACT Figshare repository",
      "topics": [
        "pact_download_figshare",
        "pact_download_figshare_private",
        "pact_download_website"
      ]
    },
    {
      "page": "pact_get",
      "title": "Get outputs/assets identifiers",
      "topics": [
        "pact_get_filename",
        "pact_get_group_id"
      ]
    },
    {
      "page": "pact_list",
      "title": "List all available outputs/assets from Pandemic PACT's Figshare repository",
      "topics": [
        "pact_list",
        "pact_list_data",
        "pact_list_download"
      ]
    },
    {
      "page": "pact_mpox_priority",
      "title": "Pandemic PACT Mpox Priorities",
      "topics": [
        "pact_mpox_priority"
      ]
    },
    {
      "page": "pact_process_figshare",
      "title": "Process Pandemic PACT data",
      "topics": [
        "pact_process_figshare",
        "pact_process_figshare_category",
        "pact_process_figshare_category_funder",
        "pact_process_figshare_category_pathogen"
      ]
    },
    {
      "page": "pact_process_website",
      "title": "Process Pandemic PACT dataset retrieved from the website",
      "topics": [
        "pact_process_website"
      ]
    },
    {
      "page": "pact_read_figshare",
      "title": "Read datasets from the Pandemic PACT Figshare repository",
      "topics": [
        "pact_read_figshare",
        "pact_read_figshare_dictionary",
        "pact_read_figshare_download"
      ]
    },
    {
      "page": "pact_read_website",
      "title": "Read datasets from the Pandemic PACT website",
      "topics": [
        "pact_read_website"
      ]
    },
    {
      "page": "pact_research_category",
      "title": "Pandemic PACT Research Categories",
      "topics": [
        "pact_research_category"
      ]
    },
    {
      "page": "pact_table",
      "title": "Process variable of interest from Pandemic PACT website data by a grouping variable",
      "topics": [
        "pact_table_category",
        "pact_table_disease",
        "pact_table_location_funder",
        "pact_table_location_institution",
        "pact_table_location_research",
        "pact_table_topic_group"
      ]
    },
    {
      "page": "who_country_info",
      "title": "World Health Organization (WHO) Country Information",
      "topics": [
        "who_country_info"
      ]
    }
  ],
  "_pkglogo": "https://github.com/OxfordIHTM/pactr/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/OxfordIHTM/pactr/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "countrycode",
    "cpp11",
    "deposits",
    "dplyr",
    "generics",
    "glue",
    "lifecycle",
    "magrittr",
    "openxlsx2",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "Rcpp",
    "rlang",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "utf8",
    "vctrs",
    "withr"
  ],
  "_vignettes": [
    {
      "source": "figshare-workflow.Rmd",
      "filename": "figshare-workflow.html",
      "title": "Figshare workflow",
      "author": "Ernest Guevarra",
      "engine": "knitr::rmarkdown",
      "headings": [
        "About the Pandemic PACT Figshare repository",
        "Figshare interface",
        "Figshare workflow",
        "Set a Figshare client",
        "List outputs/assets",
        "Download outputs/assets",
        "Read the Pandemic PACT tracker dataset and data dictionary",
        "Process the Pandemic PACT tracker dataset"
      ],
      "created": "2024-09-16 13:33:37",
      "modified": "2024-10-30 08:49:24",
      "commits": 13
    },
    {
      "source": "pactr.Rmd",
      "filename": "pactr.html",
      "title": "Introducing {pactr}",
      "engine": "knitr::rmarkdown",
      "headings": [
        "What does {pactr} do?",
        "Why develop {pactr}?"
      ],
      "created": "2024-09-17 09:38:54",
      "modified": "2024-09-17 17:29:31",
      "commits": 4
    },
    {
      "source": "website-dataset-workflow.Rmd",
      "filename": "website-dataset-workflow.html",
      "title": "Website dataset workflow",
      "author": "Ernest Guevarra",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Website data interface",
        "Website data workflow",
        "Download data available from website",
        "Read the Pandemic PACT tracker dataset from the website",
        "Process the Pandemic PACT tracker dataset from the website"
      ],
      "created": "2024-09-17 09:38:54",
      "modified": "2024-10-30 08:49:24",
      "commits": 10
    }
  ],
  "_score": 3.290034611362518,
  "_indexed": true,
  "_nocasepkg": "pactr",
  "_universes": [
    "oxfordihtm",
    "ernestguevarra"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.0.0.9000",
      "date": "2026-06-03T09:10:15.000Z",
      "distro": "noble",
      "commit": "949c74d8a8394082f92dc84053ab1460415a5289",
      "fileid": "d19372e2807a2d31ad5949d5a982e094170d91abcd2847617005d037801d1a00",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/oxfordihtm/actions/runs/26874760967"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.0.0.9000",
      "date": "2026-06-03T09:10:16.000Z",
      "distro": "noble",
      "commit": "949c74d8a8394082f92dc84053ab1460415a5289",
      "fileid": "a6d2b484fe822dfbe5059a3dd9ccd2516d0d372bcac2bdb2f9f12ee660683f5b",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/oxfordihtm/actions/runs/26874760967"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.0.0.9000",
      "date": "2026-06-03T09:10:03.000Z",
      "commit": "949c74d8a8394082f92dc84053ab1460415a5289",
      "fileid": "f93c0453b2c853adc07bc38ee6e6cdb386452b78f8f2202f1e69b26f02f9468f",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/oxfordihtm/actions/runs/26874760967"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.0.0.9000",
      "date": "2026-06-03T09:10:02.000Z",
      "commit": "949c74d8a8394082f92dc84053ab1460415a5289",
      "fileid": "5eb51914e1259554fbc82ed82e6d3adf62899b13c3f15a3ce2477ed53e1c9e68",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/oxfordihtm/actions/runs/26874760967"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.0.0.9000",
      "date": "2026-06-03T09:10:08.000Z",
      "commit": "949c74d8a8394082f92dc84053ab1460415a5289",
      "fileid": "48c651da7bafd0d631c6f4371309497ea836b3e6fb69eb1aa5776755584658b6",
      "status": "success",
      "buildurl": "https://github.com/r-universe/oxfordihtm/actions/runs/26874760967"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-06-03T09:09:41.000Z",
      "commit": "949c74d8a8394082f92dc84053ab1460415a5289",
      "fileid": "2d6be5c63a59e46e8c188b88ffa8ea769916ac80e9b97548a416c99bdc9effa0",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/oxfordihtm/actions/runs/26874760967"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-06-03T09:09:21.000Z",
      "commit": "949c74d8a8394082f92dc84053ab1460415a5289",
      "fileid": "405b4794d19ce3859f99a8909ed752f1f500ef4fa51165fa9b8ba65b1616d1a6",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/oxfordihtm/actions/runs/26874760967"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-06-03T09:09:28.000Z",
      "commit": "949c74d8a8394082f92dc84053ab1460415a5289",
      "fileid": "2e5a8ada488ac2c0af4217d9b825f55c43b1126c50b53828408609beef8506e6",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/oxfordihtm/actions/runs/26874760967"
    }
  ]
}