Package: pactr 0.0.0.9000

Ernest Guevarra

pactr: An Interface to the Pandemic PACT Database

The Pandemic PACT <https://www.pandemicpact.org/> monitors and analyses global funding and research evidence related to diseases with pandemic potential, as well as broader research preparedness efforts, and is equipped to pivot in response to outbreaks. It collects, curates, codes, and analyses data in alignment with WHO priority diseases and other selected illnesses, including pandemic influenza, mpox, and plague. Pandemic PACT aims to guide policy and decision-making for research funders, policymakers, researchers, multilateral agencies. The database is publicly available for download from its website and from Figshare. This package interfaces with the project's Figshare repository to provide programmatic access to the database along with other data products provided by the project.

Authors:Ernest Guevarra [aut, cre]

pactr_0.0.0.9000.tar.gz
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pactr.pdf |pactr.html✨
pactr/json (API)

# Install 'pactr' in R:
install.packages('pactr', repos = c('https://oxfordihtm.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/oxfordihtm/pactr/issues

Datasets:

On CRAN:

17 exports 1 stars 0.49 score 39 dependencies 12 scripts

Last updated 12 hours agofrom:7bc7bf2134. Checks:ERROR: 1 WARNING: 6. Indexed: yes.

TargetResultDate
Doc / VignettesFAILSep 17 2024
R-4.5-winWARNINGSep 17 2024
R-4.5-linuxWARNINGSep 17 2024
R-4.4-winWARNINGSep 17 2024
R-4.4-macWARNINGSep 17 2024
R-4.3-winWARNINGSep 17 2024
R-4.3-macWARNINGSep 17 2024

Exports:pact_citepact_client_setpact_download_figsharepact_download_websitepact_get_filenamepact_get_group_idpact_listpact_list_datapact_process_figsharepact_process_figshare_categorypact_process_figshare_category_funderpact_process_figshare_category_pathogenpact_process_website_diseasepact_process_website_topic_grouppact_read_figsharepact_read_figshare_dictionarypact_read_website

Dependencies:askpassbackportscheckmateclicountrycodecpp11curldepositsdplyrfansifsgenericsglueherehttr2jsonlitejsonvalidatelifecyclemagrittropensslpillarpkgconfigpurrrR6rappdirsRcpprlangrprojrootstringistringrsystibbletidyrtidyselectutf8V8vctrswithrxml2

Readme and manuals

Help Manual

Help pageTopics
Cite an output/asset available from the Pandemic PACT Figshare repositorypact_cite
Initiate a new Pandemic PACT Figshare client sessionpact_client_set
Download outputs/assets from Pandemic PACT Figshare repositorypact_download_figshare pact_download_website
Get outputs/assets identifierspact_get_filename pact_get_group_id
List all available outputs/assets from Pandemic PACT's Figshare repositorypact_list pact_list_data
Process Pandemic PACT datapact_process_figshare pact_process_figshare_category pact_process_figshare_category_funder pact_process_figshare_category_pathogen
Process variable of interest from Pandemic PACT website data by a grouping variablepact_process_website_disease pact_process_website_topic_group
Read datasets from the Pandemic PACT Figshare repositorypact_read_figshare pact_read_figshare_dictionary
Read datasets from the Pandemic PACT websitepact_read_website
Pandemic PACT Research Categoriespact_research_category
World Health Organization (WHO) Country Informationwho_country_info